Jose Arocha

Research Interests:
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Health informatics
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Clinical problem solving, reasoning, and decision making
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Cognitive methodologies for the analysis of human computer interaction, knowledge acquisition, and medical expertise
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Cognitive aspects of computerized clinical practice guidelines
Andrew Doxey

Research Interests:
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Molecular function prediction, design (proteins, DNA)
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Computational genomics
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Evolutionary bioinformatics and computational biology
[WCMR] June 18, 2018, receives Thermo Fisher Scientific Award
[Daily Bulletin] June 1, 2018, 11 CBB Members Named Outstanding Performance Award Winners
[Waterloo Stories] January 26, 2018 "Scientists find new kind of botox"
Aravindhan Ganesan

[Science Direct] August 10, 2018 "Revealing the atomistic details behind the binding of B7–1 to CD28 and CTLA-4: A comprehensive protein-protein modelling study"
[Nature] August 27, 2019 "Comprehensive in vitro characterization of PD-L1 small molecule inhibitors"
Todd Holyoak

Research interests:
- GTP-dependent phosphoenolpyruvate carboxykinases
- IgA1 protease family of bacterial proteases
John Honek

Research Interests:
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Methionine chemistry and biochemestry (amino acid methionine and its roles in proteins, cellular pathways and its functions)
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Bionanomaterials, bionanotechnology (for novel drug carriers, molecular foundations for nanodevices)
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Medicinal chemistry
- Enzymology
- Bioorganic chemistry
- Protein structure and function
[Daily Bulletin] June 1, 2018, 11 CBB Members Named Outstanding Performance Award Winners
Laura Hug

Research Interests:
- Microbial diversity and function at contaminated sites (primarily municipal landfills)
- DNA, RNA, and protein (meta-omics) sequences
- Environment remediation
- Impacts of human activities on the environment
Canada Research Chair in Environmental Microbiology [Canada Research Chair Profile]
[YouTube] October 23, 2015 "Piecing life together - microbial diversity and function through meta-omic analyses"
[Waterloo Stories] April 12, 2016 "New tree of life may hold clues to cleaning up pollution"
Subha Kalyaanamoorthy

Research Interests:
- Design/discovery of potential therapeutics to target various diseases
- Understanding the structure and pharmacology of membrane proteins
- Development of in silico methods/tools for sequence, structure and functional analysis
- Inferring the structure-function evolution of proteins
- Protein engineering for biotechnology and pharmaceutical applications
[American Chemical Society] January 23, 2012 "Exploring Inhibitor Release Pathways in Histone Deacetylases Using Random Acceleration Molecular Dynamics Simulations"
[Wiley Online Library] July 27, 2013 "Ligand release mechanisms and channels in histone deacetylases"
[Royal Society of Chemistry] December 19, 2013 "A steered molecular dynamics mediated hit discovery for histone deacetylases"
[Nature Methods] May 8, 2017 "ModelFinder: fast model selection for accurate phylogenetic estimates"
[Royal Society of Chemistry] October 24, 2017 "Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction"
Ming Li

Research Interests:
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Bioinformatics tools (protein structures, genome mapping, conducting homology searches)
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Protein structure prediction, and automated NMR protein structure determination
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Stem cell image recognition
- Deep learning, natural language processing and automated conversation, AI
Canada Research Chair in Bioinformatics [Canada Research Chair Profile]
The Royal Society of Canada Fellow
[Waterloo Stories] April 5, 2013 "RSVP: Responding to a need"
[Waterloo Stories] July 6, 2012 "Solving life's big issues, one question at a time"
Kaylena Ehgoetz Martens

Brendan McConkey

Research Interests:
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Protein structure, functions, evolution (yeast, mammalian cell lines, plant-bacterial)
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Bioinformatics, systematics and protein evolution
- Protein structure and interaction modeling
- Protein expression pattern analysis
- Molecular genetics
Elizabeth Meiering

Research Interests:
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Proteins: energetics, kinetics, mechanisms, structure, dynamics, folding, function, evolution, engineering and design, thermodynamics, kinetics (ALS, Alzheimer's, Parkinson's, prions, cancer)
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High resolution nuclear magnetic resonance spectroscopy (fluorescence, CD, NMR, FTIR, DLS)
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Optical spectroscopies
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Bioinformatics and computational modelling
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Biocomputing and protein engineering
- Biophysical chemistry and biochemistry
- Bionanotechnology and biomaterials
[Waterloo News] November 24, 2015 "New insights into protein structure could change the future of biomedicine"
[Chemistry News] August 20, 2014 "Chemist Elizabeth Meiering takes on the ALS ice bucket challenge"
Plinio Morita

Research Interests:
- mHealth and wearable technology design
- Ubiquitous sensors for smart homes and remote patient monitoring
- Big data and health data analytics
- Technology to support longer independent living
[MaRS] April 26, 2018 "UbiLab team wins Healthy Behaviour Data Challenge"
Kumaraswamy Ponnambalam

Research Interests:
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Application of intelligent systems (hydrology, water resources, decision making in health, control of satellite communications, fault detection analysis)
- Optimization
- Mathematical programming, decision making under uncertainty
- Data mining
Pascal Poupart

Research Interests:
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Machine learning and reasoning under uncertainty (artificial intelligence, computational statistics, decision and control theory)
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Health informatics (assistive technologies, behaviour recognition, smart walkers, Alzheimer’s monitoring)
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Natural language understanding (dialogue management, semantic analysis)
[National Post] May 11, 2018, weighs in on how Google's A.I. personal assistant sparks concerns about future of communication
[The Record] May 8,2018, have ties with a new Montreal sports analytics research lab in Kitchener
[Markets Insider] February 5, 2018 "Borealis AI increases brain power by adding top AI talent"
[The Globe and Mail] February 4, 2018 "How we can leverage AI to bridge academia and business"
[Waterloo Stories] April 12, 2013 "Breaking the fall: Smart walker will help prevent injuries"
David Rose

Research Interests:
- Protein structure, functions, and pharmaceuticals
- Type II Diabetes
- Bioinformatics, Systematics, and Evolution
- Molecular Genetics
- Microbiology
[YouTube Lecture] September 30, 2015 "Glycosidases in human health and disease"
George Shaker

Alternate Location:
- Satellite Campus, UW-Schlegel Research Institute for Aging, Research Building, Sensors and Devices Lab
Research Interests:
- Bio-wearable electronics and systems
- Bio-electromagnetics, bio-technology, bio-sensors and energy harvesting systems
- RF/microwave/millimeter wave/Terahertz (THz) circuits and antenna systems
- Radio frequency (RF)/microwave packaging and Electromagnetic compatibility
- (EMC)/Electromagnetic interface (EMI) analyses
- Vehicle and UAV wireless communications, navigation systems, and telematics systems
- Complex propagation and scattering phenomena
- Devices and novel electromagnetic materials and wireless sensors
Awards:
- Top downloaded paper in Medical Physics (arXiv) – October 2019
- Best Imaging Paper, CVS, 2018
- ACM MobileHCI 2017 Best Worskshop Paper Award
- IEEE APS 2017 SPC Honorable Mention Paper Award
- IEEE Sensors Most Popular Article (March 2017)
- IEEE Sensors Annual Volume Cover Page
[CBB Events] November 15, 2019 "Professor Shaker organizes a Health Canada Regulatory insights Workshop"
[CNN] November 11, 2019 "Scientists develop sensor to save children and pets from hot car deaths"
[Waterloo News] October 29, 2019 "Advancing healthcare through innovative technology"
[Inside Digital Health] June 3, 2019 "Study: Radar Monitors Sleep with Accuracy Comparable to Current Standards"
[Waterloo News] June 28, 2018 "AI and radar technologies could help diabetics manage their disease"
[Engineering News] June 28, 2018 "Researchers developing a prick-free glucose monitor"
[RD Magazine] June 28, 2018 "AI and Radar Technologies Could Help Diabetics Manage Their Disease"
[Engineering News] July 5, 2016 "Waterloo wins big with tiny power device"
Andrew Wong

Research Interests:
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Data mining and bioinformatics
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Machine intelligence, computer vision, intelligence robotics
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Pattern recognition and discovery methods of genomic and proteomic data
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DNA sequencing, colon cancer and leukemia gene and data analysis
[YouTube Lecture] September 19, 2013 "Pattern discovery and analysis of genomic and proteomic data"
Office of Research - Technology Transfer & Commercialization: