Tran, N. ., Zhang, X. ., & Li, M. . (2018). Deep Omics. Proteomics. 18:2. 1700319. (Cover Page Story).
Publications
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Solis-Reyes, S. ., Avino, M. ., Poon, A. ., & Kari, L. . (2018). An open-source k-mer based machine learning tool for fast and accurate subtyping of HIV-I genomes. PLOS ONE 13(11): E0206409. Retrieved from https://doi.org/10.1371/journal.pone.0206409.\%20pdf
Wang, T. ., & Ma, B. . (2018). Adjacent Y-ion Ratio Distributions and Its Application in Peptide Sequencing. IEEE/ACM/Transactions/on/Computational/Biology/and/Bioinformatics/16/(1),/43-51.
Wang, T. ., & Ma, B. . (2018). Adjacent Y-ion Ratio Distributions and Its Application in Peptide Sequencing. The 14th Asia Pacific Bioinformatics Conference. Presented at the. Yokohama, Japan.
Doxey, A. ., Mansfield, M. ., & Montecucco, C. . (2018). Discovery of novel bacterial toxins by genomics and computational biology. Toxicon. 147:2-12.
Shen, J. ., Pagala, V. ., Breuer, A. ., Peng, J. ., Ma, B. ., & Wang, X. . (2018). Spectral Library Search Improves Assignment of TMT Labeled MS/MS Spectra. Journal of Proteome Research.
Capellini, T. ., Chen, H. ., Cao, J. ., Doxey, A. ., Kiapour, K. ., Schoor, M. ., & Kingsley, D. . (2017). The locus of selection on common GDF5 height and arthritis risk variants in humans. Nature Genetics. 49:1202-1210.
D\textquoterightAlessio, M. ., Nordeste, R. ., Doxey, A. ., & Charles, T. . (2017). Transcriptome analysis of polyhydroxybutyrate cycle mutants reveals discrete loci connecting nitrogen utilization and carbon storage in Sinorhizobium meliloti. MSystems. 2:E00035-17.
Karamichalis, R. ., & Kari, L. . (2017). ModMaps3D: An interactive webtool for the quantification and 3D visualization of interrelationships in a dataset of DNA sequences. Bioinformatics. Retrieved from https://cs.uwaterloo.ca/~lila/pdfs/Modmap_tools_final.pdf
Liu, Y. ., Ma, B. ., Zhang, K. ., & Lajoie, G. . (2017). An approach for peptide identification by de novo sequencing of mixture spectra. IEEE/ACM/Transactions/on/Computational/Biology/and/Bioinformatics/14:326-336.