Mooney, S. ., Talebian, V. ., Jolly, M. ., Jia, D. ., Gromala, M. ., Levine, H. ., & McConkey, B. . (2017). The GRHL2/ZEB feedback loop—A key axis in the regulation of EMT in breast cancer. Journal of Cellular Biochemistry, 118:2559-2570.
Publications
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Tran, N. ., Zhang, X. ., Xin, L. ., Shan, B. ., & Li, M. . (2017). De novo peptide sequencing by deep learning. Proc. National Academy of Sciences of the USA, 114(31), 8247-8252.
Adams, J. ., Mansfield, M. ., Richard, D. ., & Doxey, A. . (2017). Lineage-specific mutational clustering in protein structures predicts evolutionary shifts in function. Bioinformatics. 33:1338-1345.
Sun, W. ., Liu, Y. ., Lajoie, G. ., Ma, B. ., & Zhang, K. . (2017). An Improved Approach for N-linked Glycan Structure Identification from HCD MS/MS Spectra. IEEE/ACM/Transactions/on/Computational/Biology/and/Bioinformatics./DOI:/10.1109/TCBB.2017.2701819.
Yuasa, S. ., Chen, Z. ., Ma, B. ., & Wang, L. . (2017). Designing and Implementing Algorithms for the Closest String Problem. International Workshop on Frontiers in Algorithmics. 79-90. Presented at the.
Liu, Y. ., Sun, W. ., John, J. ., Lajoie, G. ., Ma, B. ., & Zhang, K. . (2016). De Novo Sequencing Assisted Approach for Characterizing Mixture MS/MS Spectra. IEEE Transactions on Nanobioscience 15 (2), 166-176.
Ma, B. . (2016). De novo Peptide Sequencing. In Proteome Informatics, 15-38. Royal Society of Chemistry Publishing.
Chen, Z. ., Ma, B. ., & Wang, L. . (2016). Randomized Fixed-Parameter Algorithms for the Closest String Problem. Algorithmica 74(1): 466-484.
Sun, W. ., Kuljanin, M. ., Pittock, P. ., Ma, B. ., Zhang, K. ., & Lajoie, G. . (2016). An Effective Approach for Glycan Structure De Novo Sequencing from HCD Spectra. IEEE Transactions on Nanobioscience 15 (2), 177-184.
Jameson, E. ., Doxey, A. ., Airs, R. ., Purdy, K. ., Murrell, J. ., & Chen, Y. . (2016). Metagenomic datamining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems. Microbial Genomics. 2(9). (DOI 10.1099 Mgen.0.000080).