Adams, J. ., Mansfield, M. ., Richard, D. ., & Doxey, A. . (2017). Lineage-specific mutational clustering in protein structures predicts evolutionary shifts in function. Bioinformatics. 33:1338-1345.
Publications
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Sun, W. ., Liu, Y. ., Lajoie, G. ., Ma, B. ., & Zhang, K. . (2017). An Improved Approach for N-linked Glycan Structure Identification from HCD MS/MS Spectra. IEEE/ACM/Transactions/on/Computational/Biology/and/Bioinformatics./DOI:/10.1109/TCBB.2017.2701819.
Yuasa, S. ., Chen, Z. ., Ma, B. ., & Wang, L. . (2017). Designing and Implementing Algorithms for the Closest String Problem. International Workshop on Frontiers in Algorithmics. 79-90. Presented at the.
Capellini, T. ., Chen, H. ., Cao, J. ., Doxey, A. ., Kiapour, K. ., Schoor, M. ., & Kingsley, D. . (2017). The locus of selection on common GDF5 height and arthritis risk variants in humans. Nature Genetics. 49:1202-1210.
D\textquoterightAlessio, M. ., Nordeste, R. ., Doxey, A. ., & Charles, T. . (2017). Transcriptome analysis of polyhydroxybutyrate cycle mutants reveals discrete loci connecting nitrogen utilization and carbon storage in Sinorhizobium meliloti. MSystems. 2:E00035-17.
Chen, Z. ., Ma, B. ., & Wang, L. . (2016). Randomized Fixed-Parameter Algorithms for the Closest String Problem. Algorithmica 74(1): 466-484.
Sun, W. ., Kuljanin, M. ., Pittock, P. ., Ma, B. ., Zhang, K. ., & Lajoie, G. . (2016). An Effective Approach for Glycan Structure De Novo Sequencing from HCD Spectra. IEEE Transactions on Nanobioscience 15 (2), 177-184.
Jameson, E. ., Doxey, A. ., Airs, R. ., Purdy, K. ., Murrell, J. ., & Chen, Y. . (2016). Metagenomic datamining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems. Microbial Genomics. 2(9). (DOI 10.1099 Mgen.0.000080).
Tran, N. ., Rahman, M. ., He, L. ., Xin, L. ., Shan, B. ., & Li, M. . (2016). Complete de novo assembly of monoclonal antibody sequences. Nature, Scientific Reports 6, doi:10.1038 Srep31730.
Kari, L. ., Konstantinidis, S. ., Kopecki, S. ., & Solis-Reyes, S. . (2016). Additive methods for genomic signatures. BMC Bioinformatics, 17:313. Retrieved from https://cs.uwaterloo.ca/~lila/pdfs/additive_final.pdf