Chen, Z. ., Ma, B. ., & Wang, L. . (2016). Randomized Fixed-Parameter Algorithms for the Closest String Problem. Algorithmica 74(1): 466-484.
Publications
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Sun, W. ., Kuljanin, M. ., Pittock, P. ., Ma, B. ., Zhang, K. ., & Lajoie, G. . (2016). An Effective Approach for Glycan Structure De Novo Sequencing from HCD Spectra. IEEE Transactions on Nanobioscience 15 (2), 177-184.
Jameson, E. ., Doxey, A. ., Airs, R. ., Purdy, K. ., Murrell, J. ., & Chen, Y. . (2016). Metagenomic datamining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems. Microbial Genomics. 2(9). (DOI 10.1099 Mgen.0.000080).
Karamichalis, R. ., Kari, L. ., Konstantinidis, S. ., & Kopecki, S. . (2015). An investigation into inter- and intragenomic variations of graphic genomic signatures. BMC Bioinformatics, 16:246. Retrieved from https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0655-4
Petrenko, P. ., Kurtz, D. ., Lobb, B. ., Neufeld, J. ., & Doxey, A. . (2015). MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes. BMC Biology. 13:92.
Liu, Y. ., Sun, W. ., Lajoie, G. ., Ma, B. ., & Zhang, K. . (2015). An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein Database. International Symposium on Bioinformatics Research and Applications 223-234. Norfolk, Virginia.
Cheng, Z. ., Li, J. ., Niu, Y. ., Zhang, X. ., Woody, O. ., Xiong, Y. ., Djonovic, S. ., Millet, Y. ., Bush, J. ., & McConkey, B. . (2015). Pathogen-secreted proteases activate a novel plant immune pathway. Nature, 521:213.
Sun, W. ., Lajoie, G. ., Ma, B. ., & Zhang, K. . (2015). A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass Spectrometry. International Symposium on Bioinformatics Research and Applications. 320-330. Presented at the.
Lobb, B. ., Kurtz, D. ., Moreno-Hagelsieb, G. ., & Doxey, A. . (2015). Remote homology and the functions of metagenomic dark matter. Frontiers in Genetics. 6:234.
Johnston, C. ., Skinnider, M. ., Wyatt, M. ., Li, X. ., Yang, L. ., Zechel, D. ., Ma, B. ., & Magarvey, N. . (2015). An Automated Genomes-to-Natural Products Platform (GNP). Nature Communications. DOI: 10.1038 Ncomms9421.