Dexter, D. ., & Brown, D. . (2013). Fast half-sibling population reconstruction: theory and algorithms. Algorithms for Molecular Biology 8: 20.
Publications
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Lin, H. ., He, L. ., & Ma, B. . (2013). A Combinatorial Approach to the Peptide Feature Matching Problem for Label-Free Quantification. Bioinformatics. 29 (14): 1768-1775.
Brown, D. ., & Truszkowski, J. . (2013). Fast error-tolerant quartet phylogeny algorithms. Theoretical Computer Science 483: 104-114.
Brown, D. ., & Dexter, D. . (2012). Combinatorial approaches to half-sibling reconstruction.
Truszkowski, J. ., Hao, Y. ., & Brown, D. . (2012). Towards a practical O(n log n) phylogeny algorithm. Algorithms in Molecular Biology 7:32.
Ma, B. ., & Johnson, R. . (2012). De Novo Sequencing and Homology Searching. Molecular \& Cellular Proteomics 11. DOI 10.1074 Mcp.O111.014902.
Gidvani, R. ., Sudmant, P. ., Li, G. ., DaSilva, L. ., McConkey, B. ., Duncker, B. ., & Ingalls, B. . (2012). A quantitative model of the initiation of DNA replication in Saccharomyces cerevisiae predicts the effects of system perturbations. BMC Systems Biology, 6:78.
Brown, D. ., & Truszkowski, J. . (2012). Fast phylogeny algorithms using locality-sensitive hashing.
Whelan, F. ., Meehan, C. ., Golding, G. ., McConkey, B. ., & Bowdish, D. . (2012). The evolution of the class A scavenger receptors. BMC Evolutionary Biology, 12:227.
Ackerman, M. ., Brown, D. ., & Loker, D. . (2012). Effects of rooting via outgroups on ingroup topology in phylogeny. Proceedings of the International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 7 Pages. Presented at the.