Xu, J. ., & Li, M. . (2003). Assessing RAPTOR's new linear programming approach for fold recognition in CAFASP3. PROTEINS: Structure, Function, and Genetics, 53(S6):579-584. Invited Paper by CASP5 Organizer.
Reference author: J. Xu
First name
J.
Last name
Xu
Xu, J. ., Brown, D. ., Li, M. ., & Ma, B. . (2004). Optimizing Multiple Spaced Seeds for Homology Search.
Xu, J. ., Li, M. ., & Xu, Y. . (2004). Protein Threading by Linear Programming: Theoretical Analysis and Computational Results. Journal of Combinatorial Optimization. 8:4, 403--418.
Xu, J. ., Yu, L. ., & Li, M. . (2005). Consensus fold recognition by predicted model quality.
Tang, T. ., Xu, J. ., & Li, M. . (2005). Discovering sequence-structure motifs from protein segments and two applications.
Xu, J. ., Brown, D. ., Li, M. ., & Ma, B. . (2006). Optimizing Multiple Spaced Seeds for Homology Search. Journal of Computational Biology. 13(7): 1355-1368.
Qian, J. ., Li, S. ., Bu, D. ., Li, M. ., & Xu, J. . (2007). Finding compact structural motifs in many proteins.
Gao, X. ., Bu, D. ., Li, S. ., Li, M. ., & Xu, J. . (2007). Consensus contact prediction by linear programming. CSB’2007. San Diego, CA. Presented at the.
Gao, X. ., Bu, D. ., Li, S. ., Xu, J. ., & Li, M. . (2007). FragQA: predicting local fragment quality of a sequence-structure alignment.
Zhang, J. ., Gao, X. ., Xu, J. ., & Li, M. . (2008). Rapid and accurate side chain prediction with local backbone information.