Reference author: J. Xu

First name

J.

Last name

Xu

Xu, J., & Li, M. (2003). Assessing RAPTOR's new linear programming approach for fold recognition in CAFASP3 PROTEINS: Structure, Function, and Genetics, 53(S6):579-584. Invited Paper by CASP5 Organizer.

Xu, J., Brown, D., Li, M., & Ma, B. (2004). Optimizing Multiple Spaced Seeds for Homology Search

Xu, J., Li, M., & Xu, Y. (2004). Protein Threading by Linear Programming: Theoretical Analysis and Computational Results Journal of Combinatorial Optimization. 8:4, 403--418.

Xu, J., Yu, L., & Li, M. (2005). Consensus fold recognition by predicted model quality

Tang, T., Xu, J., & Li, M. (2005). Discovering sequence-structure motifs from protein segments and two applications

Xu, J., Brown, D., Li, M., & Ma, B. (2006). Optimizing Multiple Spaced Seeds for Homology Search Journal of Computational Biology. 13(7): 1355-1368.

Qian, J., Li, S., Bu, D., Li, M., & Xu, J. (2007). Finding compact structural motifs in many proteins

Gao, X., Bu, D., Li, S., Li, M., & Xu, J. (2007). Consensus contact prediction by linear programming Presented at the CSB’2007. San Diego, CA conference.

Gao, X., Bu, D., Li, S., Xu, J., & Li, M. (2007). FragQA: predicting local fragment quality of a sequence-structure alignment

Zhang, J., Gao, X., Xu, J., & Li, M. (2008). Rapid and accurate side chain prediction with local backbone information