Bansal, N., Lewenstein, M., Ma, B., & Zhang, K. (2010). On the Longest Common Rigid Subsequence Problem Algorithmica 56(2): 270-280.
References
Filter by:
2010
Liu, X., Xin, L., Shan, B., & Ma, B. (2010). Better Score Function for Peptide Identification with ETD MS/MS Spectra BMC Bioinformatics. 11 (Suppl 1): S4.
Cheng, Z., McConkey, B., & Glick, B. (2010). Proteomic studies of plant-bacterial interactions Soil Biology and Biochemistry, 42:1673-1684.
Brown, D., & Golod, D. (2010). Decoding HMMs using the k best paths: algorithms and applications BMC Bioinformatics 11 (Suppl 1): S28.
Zhang, Z., Lin, H., & Ma, B. (2010). ZOOM Lite: Next-generation Sequencing Data Mapping and Visualization Software Nucleic Acids Research. 38 (suppl 2): W743-W748.
2009
Brejova, B., Vinar, T., Chen, Y., Wang, S., Zhao, G., Brown, D., … Zhou, Y. (2009). Finding genes in Schistosoma japonicum: annotating novel genomes with help of extrinsic evidence Nucleic Acids Research 37: E52.
Ma, B., & Sun, X. (2009). More Efficient Algorithm for Closest String and Substring Problems SIAM J. Computing 39(4): 1432-1443.
Li, W., Ma, B., & Zhang, K. (2009). Amino Acid Classification and Hash Seeds for Homology Search
Brown, D., & Golod, D. (2009). A tutorial of techniques for improving standard hidden Markov model algorithms Journal of Bioinformatics and Computational Biology 7: 737-754.
Ma, B., & Yao, H. (2009). Seed Optimization for I.I.D. Similarities Is No Easier than Optimal Golomb Ruler Design Information Processing Letter 109(19): 1120-1124.