Sun, S., Yang, F., Yang, Q., Zhang, H., Wang, Y., Bu, D., & Ma, B. (2012). MS-Simulator: Predicting Y-Ion Intensities for Peptides with Two Charges Based on the Intensity Ratio of Neighboring Ions Journal of Proteome Research. DOI: 10.1021 Pr300235v.
References
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2012
Li, W., Ma, B., & Zhang, K. (2012). Efficient Filtration for Similarity Search with Spaced k-mer Neighbors
Cui, X., Li, S., Bu, D., Alipanahi, B., & Li, M. (2012). How accurately can we model protein structures with dihedral angles?
Brown, D., & Dexter, D. (2012). Combinatorial approaches to half-sibling reconstruction
Truszkowski, J., Hao, Y., & Brown, D. (2012). Towards a practical O(n log n) phylogeny algorithm Algorithms in Molecular Biology 7:32.
Ma, B., & Johnson, R. (2012). De Novo Sequencing and Homology Searching. Molecular \& Cellular Proteomics 11 DOI 10.1074 Mcp.O111.014902.
Gidvani, R., Sudmant, P., Li, G., DaSilva, L., McConkey, B., Duncker, B., & Ingalls, B. (2012). A quantitative model of the initiation of DNA replication in Saccharomyces cerevisiae predicts the effects of system perturbations BMC Systems Biology, 6:78.
Brown, D., & Truszkowski, J. (2012). Fast phylogeny algorithms using locality-sensitive hashing
Whelan, F., Meehan, C., Golding, G., McConkey, B., & Bowdish, D. (2012). The evolution of the class A scavenger receptors BMC Evolutionary Biology, 12:227.
Ackerman, M., Brown, D., & Loker, D. (2012). Effects of rooting via outgroups on ingroup topology in phylogeny Presented at the Proceedings of the International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 7 Pages conference.