References

Cui, X., Li, S., He, L., & Li, M. (2014). Fingerprinting protein structures effectively and efficieintly Bioinformatics,30:7 949-955.

Ackerman, M., Brown, D., & Loker, D. (2014). Effects of rooting via outgroups on ingroup topology in phylogeny International Journal of Bioinformatics Research and Applications 10(4 5): 426-446.

Nascimento, F., Rossi, M., Soares, C., McConkey, B., & Glick, B. (2014). New insights into 1-aminocyclopropane-1-carboxylate (ACC) deaminase phylogeny evolution and ecological significance PLoS One, 9:E99168.

DasGupta, B., He, X., Li, M., Tromp, J., & Zhang, L. (2014). Nearest neighbor interchange and related distances Encyclopedia of Algorithms, Springer.

Chen, Z., Ma, B., & Wang, L. (2014). Randomized and Parameterized Algorithms for the Closest String Problem Presented at the The 25th Symposium on Combinatorial Pattern Matching. 100-109 conference.

Petrenko, P., & Doxey, A. (2014). mimicMe: a webserver for prediction and analysis of host-like proteins in microbial pathogens Bioinformatics. 31:590-592.

He, L., Xin, L., Shan, B., Lajoie, G., & Ma, B. (2014). GlycoMaster DB:Software to Assist the Automated Identification of N-Linked Glycopeptides by Tandem Mass Spectrometry Journal of Proteome Research. 13(9):3881-95.

Cui, X., Li, S., Bu, D., & Li, M. (2013). Towards reliable automatic protein structure alignment Presented at the WABI 2013 Sept. 2-4, Sophia Antipolis, France, Pp. 18-32 conference.

Meshram, M., Naderi, S., McConkey, B., Ingalls, B., Scharer, J., & Budman, H. (2013). Modeling the coupled extracellular and intracellular environments in mammalian cell culture Metabolic Engineering, 19:57-68.

Alipanahi, B., Krislock, N., Wolkowicz, H., Ghodsi, A., Donaldson, L., & Li, M. (2013). Determining protein structures from NOESY distance constraints by semidefinite programming J. Computat. Biol., 20:4 296-310.