Meshram, M., Naderi, S., McConkey, B., Ingalls, B., Scharer, J., & Budman, H. (2013). Modeling the coupled extracellular and intracellular environments in mammalian cell culture Metabolic Engineering, 19:57-68.
References
Filter by:
Alipanahi, B., Krislock, N., Wolkowicz, H., Ghodsi, A., Donaldson, L., & Li, M. (2013). Determining protein structures from NOESY distance constraints by semidefinite programming J. Computat. Biol., 20:4 296-310.
Cui, X., Li, S., Bu, D., & Li, M. (2013). Towards reliable automatic protein structure alignment Nucleic Acids Research, 37:12, 1-7.
Ackerman, M., Brown, D., & Loker, D. (2012). Effects of rooting via outgroups on ingroup topology in phylogeny Presented at the Proceedings of the International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 7 Pages conference.
Masella, A., Bartram, A., Truszkowski, J., Brown, D., & Neufeld, J. (2012). PANDAseq: paired-end assembler for illumina sequences BMC Bioinformatics Volume 13, Article Number: 31.
He, L., Han, X., & Ma, B. (2012). De Novo Sequencing with Limited Number of Post-Translational Modifications per Peptide
Bu, D., Li, S., & Li, M. (2012). Clustering 100,000 potein structure decoys in minutes IEEE/ACM/Trans./Comput./Biol./Bioinf./9:3,/765-773.
Zhang, J., Xin, L., Shan, B., Chen, W., Xie, M., Yuen, D., … Ma, B. (2012). PEAKS DB: De Novo Sequencing Assisted Database Search for Sensitive and Accurate Peptide Identification Molecular & Cellular Proteomics 11. DOI, 10.1074 Mcp.M111.010587.
Alipanahi, B., Krislock, N., Wolkowicz, H., Ghodsi, A., Donaldson, L., & Li, M. (2012). Protein Structure by Semidefinite Facial Reduction Presented at the RECOMB 2012. Pp. 1-11, Barcelona, Spain conference.
Meshram, M., Naderi, S., McConkey, B., Budman, H., Scharer, J., & Ingalls, B. (2012). Population-based modeling of the progression of apoptosis in mammalian cell culture Biotechnology and Bioengineering 109:1193-1204.