References

Lobb, B., & Doxey, A. (2016). Novel function discovery through sequence and structural data mining Current Opinion in Structural Biology. 38:53-61.

Liu, Y., Sun, W., John, J., Lajoie, G., Ma, B., & Zhang, K. (2016). De Novo Sequencing Assisted Approach for Characterizing Mixture MS/MS Spectra IEEE Transactions on Nanobioscience 15 (2), 166-176.

Ma, B. (2016). De novo Peptide Sequencing In Proteome Informatics, 15-38. Royal Society of Chemistry Publishing.

Mansfield, M., Adams, J., & Doxey, A. (2015). Botulinum neurotoxin homologs in non-Clostridium species FEBS Letters. 589:342-8.

Kari, L., Hill, K., Sayem, A., Karamichalis, R., Bryans, N., Davis, K., & Dattani, N. (2015). Mapping the space of genomic signatures PLOS ONE 10(5): E0119815. Doi:10.1371 Journal.Pone.0119815. Retrieved from https://cs.uwaterloo.ca/~lila/pdfs/Space_of_Genomic_Signatures.pdf

Marinier, E., Brown, D., & McConkey, B. (2015). Pollux: platform-independent error correction of single and mixed genomes BMC Bioinformatics 16:10.

Karamichalis, R., Kari, L., Konstantinidis, S., & Kopecki, S. (2015). An investigation into inter- and intragenomic variations of graphic genomic signatures BMC Bioinformatics, 16:246. Retrieved from https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0655-4

Petrenko, P., Kurtz, D., Lobb, B., Neufeld, J., & Doxey, A. (2015). MetAnnotate: function-specific taxonomic profiling and comparison of metagenomes BMC Biology. 13:92.

Liu, Y., Sun, W., Lajoie, G., Ma, B., & Zhang, K. (2015). An Approach for Matching Mixture MS/MS Spectra with a Pair of Peptide Sequences in a Protein Database International Symposium on Bioinformatics Research and Applications 223-234. Norfolk, Virginia.

Cheng, Z., Li, J., Niu, Y., Zhang, X., Woody, O., Xiong, Y., … McConkey, B. (2015). Pathogen-secreted proteases activate a novel plant immune pathway Nature, 521:213.