Jameson, E., Doxey, A., Airs, R., Purdy, K., Murrell, J., & Chen, Y. (2016). Metagenomic datamining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems Microbial Genomics. 2(9). (DOI 10.1099 Mgen.0.000080).
References
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2016
Tran, N., Rahman, M., He, L., Xin, L., Shan, B., & Li, M. (2016). Complete de novo assembly of monoclonal antibody sequences Nature, Scientific Reports 6, Doi:10.1038 Srep31730.
Kari, L., Konstantinidis, S., Kopecki, S., & Solis-Reyes, S. (2016). Additive methods for genomic signatures BMC Bioinformatics, 17:313. Retrieved from https://cs.uwaterloo.ca/~lila/pdfs/additive_final.pdf
2015
Cheng, Z., Li, J., Niu, Y., Zhang, X., Woody, O., Xiong, Y., … McConkey, B. (2015). Pathogen-secreted proteases activate a novel plant immune pathway Nature, 521:213.
Sun, W., Lajoie, G., Ma, B., & Zhang, K. (2015). A Novel Algorithm for Glycan de novo Sequencing Using Tandem Mass Spectrometry Presented at the International Symposium on Bioinformatics Research and Applications. 320-330 conference.
Lobb, B., Kurtz, D., Moreno-Hagelsieb, G., & Doxey, A. (2015). Remote homology and the functions of metagenomic dark matter Frontiers in Genetics. 6:234.
Johnston, C., Skinnider, M., Wyatt, M., Li, X., Yang, L., Zechel, D., … Magarvey, N. (2015). An Automated Genomes-to-Natural Products Platform (GNP) Nature Communications. DOI: 10.1038 Ncomms9421.
Yang, L., Ibrahim, A., Johnston, C., Skinnider, M., Ma, B., & Magarvey, N. (2015). Exploration of Nonribosomal Peptide Families with an Automated Informatic Search Algorithm Chemistry & Biology 22 (9), 1259-1269.
Ma, B. (2015). Novor: Real-Time Peptide de Novo Sequencing Software Journal of American Society of Mass Spectrometry 26 (11), 1885-1894.
Doxey, A., Kurtz, D., Sauder, L., Lynch, M., & Neufeld, J. (2015). Aquatic metagenomes implicate Thaumarchaeaota in global cobalamin production ISME Journal. 9:461-71.