Member publications

A list of microbe-related research published by members of the Waterloo Centre for Microbial Research since 2017. This collection is organized by member using the newest APA citation guidelines.

William Anderson

Bai, Y., Moo-Young, M., & Anderson, W. A. (2019). A mechanistic model for gas–€“liquid mass transfer prediction in a rocking disposable bioreactor. Biotechnology and Bioengineering, 116(8), 1986–1998.
Bai, Y., Moo-Young, M., & Anderson, W. A. (2019). Characterization of power input and its impact on mass transfer in a rocking disposable bioreactor. Chemical Engineering Science, 209, 115183.
Cholewinski, A., Dadzie, E., Sherlock, C., Anderson, W. A., Charles, T. C., Habib, K., Young, S. B., & Zhao, B. (2022). A critical review of microplastic degradation and material flow analysis towards a circular economy. Environmental Pollution (Barking, Essex: 1987), 315, 120334.
Derraik, J. G. B., Anderson, W. A., Connelly, E. A., & Anderson, Y. C. (2020). Rapid Review of SARS-CoV-1 and SARS-CoV-2 Viability, Susceptibility to Treatment, and the Disinfection and Reuse of PPE, Particularly Filtering Facepiece Respirators. International Journal of Environmental Research and Public Health, 17(17), Article 17.
Harfoot, R., Yung, D. B. Y., Anderson, W. A., Wild, C. E. K., Coetzee, N., Hernández, L. C., Lawley, B., Pletzer, D., Derraik, J. G. B., Anderson, Y. C., & Quiñones-Mateu, M. E. (2022). Ultraviolet-C Irradiation, Heat, and Storage as Potential Methods of Inactivating SARS-CoV-2 and Bacterial Pathogens on Filtering Facepiece Respirators. Pathogens, 11(1), Article 1.
Kaur, A., Anderson, W. A., Tanvir, S., & Kansal, S. K. (2019). Solar light active silver/iron oxide/zinc oxide heterostructure for photodegradation of ciprofloxacin, transformation products and antibacterial activity. Journal of Colloid and Interface Science, 557, 236–253.
Liu, M., Bauman, L., Nogueira, C. L., Aucoin, M. G., Anderson, W. A., & Zhao, B. (2022). Antimicrobial polymeric composites for high-touch surfaces in healthcare applications. Current Opinion in Biomedical Engineering, 22, 100395.
Muralidharan, S. K., Bauman, L., Anderson, W. A., & Zhao, B. (2020). Recyclable antimicrobial sulphonated poly (ether ether ketone) –€“ copper films: Flat vs micro-pillared surfaces. Materials Today Communications, 25, 101485.
Schmidt, T., & Anderson, W. A. (2017). Biotrickling Filtration of Air Contaminated with 1-Butanol. Environments, 4(3), 57.
Tanvir, F., Yaqub, A., Tanvir, S., & Anderson, W. A. (2017a). Colorimetric enumeration of bacterial contamination in water based on β-galactosidase gold nanoshell activity. Enzyme and Microbial Technology, 99, 49–€“56.
Tanvir, F., Yaqub, A., Tanvir, S., & Anderson, W. A. (2017b). Poly-L-arginine Coated Silver Nanoprisms and Their Anti-Bacterial Properties. Nanomaterials, 7(10), Article 10.

Marc Aucoin

Blondeel, E. J. M., & Aucoin, M. G. (2018). Supplementing glycosylation: A review of applying nucleotide-sugar precursors to growth medium to affect therapeutic recombinant protein glycoform distributions. Biotechnology Advances, 36(5), 1505–1523.
Boegel, S. J., Gabriel, M., Sasges, M., Petri, B., D’Agostino, M. R., Zhang, A., Ang, J. C., Miller, M. S., Meunier, S. M., & Aucoin, M. G. (2021). Robust Evaluation of Ultraviolet-C Sensitivity for SARS-CoV-2 and Surrogate Coronaviruses. Microbiology Spectrum, 9(2), e00537-21.
Bruder, M. R., & Aucoin, M. G. (2022). Utility of Alternative Promoters for Foreign Gene Expression Using the Baculovirus Expression Vector System. Viruses, 14(12), Article 12.
Bruder, M. R., & Aucoin, M. G. (2023). Evaluation of Virus-Free Manufacture of Recombinant Proteins Using CRISPR-Mediated Gene Disruption in Baculovirus-Infected Insect Cells. Vaccines, 11(2), 225.
Bruder, M. R., Walji, S.-D., & Aucoin, M. G. (2021). Comparison of CRISPR–Cas9 Tools for Transcriptional Repression and Gene Disruption in the BEVS. Viruses, 13(10), Article 10.
Dare, E. V., Gabriel, M., Begum, A., Sasges, M., & Aucoin, M. G. (2017). The effect of hydrogen peroxide produced during ultraviolet disinfection of CHO cell culture media. Process Biochemistry, 61, 147-€–155.
Delumeau, L.-V., Asgarimoghaddam, H., Alkie, T., Jones, A. J. B., Lum, S., Mistry, K., Aucoin, M. G., DeWitte-Orr, S., & Musselman, K. P. (2021). Effectiveness of antiviral metal and metal oxide thin-film coatings against human coronavirus 229E. APL Materials, 9(11), 111114.
Gabriel, M. A., Dare, E. V., Meunier, S. M., Campbell, J. L., Sasges, M. R., & Aucoin, M. G. (2019). Ultraviolet irradiation of trypsin, lysozyme and β-galactosidase: How does UVC affect these enzymes when used as a secondary barrier against adventitious agents? Vaccine, 37(43), 6518–€“6525.
Ganobis, C. M., Al-Abdul-Wahid, M. S., Renwick, S., Yen, S., Carriero, C., Aucoin, M. G., & Allen-Vercoe, E. (2020). 1D 1H NMR as a Tool for Fecal Metabolomics. Current Protocols in Chemical Biology, 12(3), e83.
Havaei, S. M., Aucoin, M. G., & Jahanian-Najafabadi, A. (2021). Pseudomonas Exotoxin-Based Immunotoxins: Over Three Decades of Efforts on Targeting Cancer Cells With the Toxin. Frontiers in Oncology, 11, 781800.
Lall, D., Miscevic, D., Bruder, M., Westbrook, A., Aucoin, M., Moo-Young, M., & Perry Chou, C. (2021). Strain engineering and bioprocessing strategies for biobased production of porphobilinogen in Escherichia coli. Bioresources and Bioprocessing, 8(1), 1–16.
Liu, M., Bauman, L., Nogueira, C. L., Aucoin, M. G., Anderson, W. A., & Zhao, B. (2022). Antimicrobial polymeric composites for high-touch surfaces in healthcare applications. Current Opinion in Biomedical Engineering, 22, 100395.
Logan, M., Manalil, J., Notte, C., Kearse, C., George, S., Zeiser, A., Farrell, P., & Aucoin, M. G. (2019). A flow cytometric granularity assay for the quantification of infectious virus. Vaccine, 37(47), 7090-€“7099.
Logan, M., Rinas, K., McConkey, B., & Aucoin, M. G. (2022). Vero cells gain renal tubule markers in low-calcium and magnesium chemically defined media. Scientific Reports, 12(1), Article 1.
Lourenco Nogueira, C., Boegel, S. J., Shukla, M., Ngo, W., Jones, L., & Aucoin, M. G. (2022). Antiviral Activity of Contemporary Contact Lens Care Solutions against Two Human Seasonal Coronavirus Strains. Pathogens, 11(4), Article 4.
Marcali, M., Aucoin, M. G., & Ren, C. (2021). Hemagglutination Assay to Quantify Influenza A Virus Like Particles in Droplets. MicroTAS 2021 - 25th International Conference on Miniaturized Systems for Chemistry and Life Sciences, 985–€“986.
Marcali, M., Chen, X., Aucoin, M. G., & Ren, C. L. (2022). Droplet formation of biological non-Newtonian fluid in T-junction generators. II. Model for final droplet volume prediction. Physical Review E, 105(2), 025106.
Meunier, S. M., Sasges, M. R., & Aucoin, M. G. (2017). Evaluating ultraviolet sensitivity of adventitious agents in biopharmaceutical manufacturing. Journal of Industrial Microbiology and Biotechnology, 44(6), 893–€“909.
Moussa, H. I., Chan, W. Y., Logan, M., Aucoin, M. G., & Tsui, T. Y. (2020). Limitation in Controlling the Morphology of Mammalian Vero Cells Induced by Cell Division on Asymmetric Tungsten-Silicon Oxide Nanocomposite. Materials, 13(2), Article 2.
Moussa, H. I., Logan, M., Chan, W. Y., Wong, K., Rao, Z., Aucoin, M. G., & Tsui, T. Y. (2018). Pattern-dependent mammalian cell (Vero) morphology on tantalum/silicon oxide 3D nanocomposites. Materials, 11(8).
Moussa, H. I., Logan, M., Siow, G. C., Phann, D. L., Rao, Z., Aucoin, M. G., & Tsui, T. Y. (2017). Manipulating mammalian cell morphologies using chemical-mechanical polished integrated circuit chips. Science and Technology of Advanced Materials, 18(1), 839–€“856.
Moussa, H. I., Logan, M., Wong, K., Rao, Z., Aucoin, M. G., & Tsui, T. Y. (2018). Nanoscale-textured tantalum surfaces for mammalian cell alignment. Micromachines, 9(9).
Nogueira, C. L., Boegel, S. J., Shukla, M., Ngo, W., Jones, L., & Aucoin, M. G. (2022). The impact of a rub and rinse regimen on removal of human coronaviruses from contemporary contact lens materials. Contact Lens and Anterior Eye, 45(6), 101719.
Quattrociocchi, M., Boegel, S. J., & Aucoin, M. G. (2021). Enhanced characterization of yeast hydrolysate combining acid digestion and 1D-1H NMR targeted profiling. The Canadian Journal of Chemical Engineering, 99(S1), S7–S17.
Shafiee, F., Aucoin, M. G., & Jahanian-Najafabadi, A. (2019). Targeted Diphtheria Toxin-Based Therapy: A Review Article. Frontiers in Microbiology, 10.
Srirangan, K., Akawi, L. K., Chou, C. P., Aucoin, M. G., Stacey, L. E., & Newton, C. (2017). Use of a case on metabolically engineered Escherichia coli to develop a framework for the design and analysis of bioprocesses. International Journal of Engineering Education, 33(2), 751–760.
Tsui, T. Y., Logan, M., Moussa, H. I., & Aucoin, M. G. (2018). What’s happening on the other side? Revealing nano-meter scale features of mammalian cells on engineered textured tantalum surfaces. Materials, 12(1).
Varga, J. F. A., Brunner, S. R., Cheng, G., Min, D., Aucoin, M. G., Doxey, A. C., & Dixon, B. (2022). Identification and characterization of a novel peptide from rainbow trout (Oncorhynchus mykiss) with antimicrobial activity against Streptococcus iniae. Developmental & Comparative Immunology, 137, 104518.
Walji, S.-D., & Aucoin, M. G. (2020). A critical evaluation of current protocols for self-sterilizing surfaces designed to reduce viral nosocomial infections. American Journal of Infection Control, 48(10), 1255–1260.
Walji, S.-D., Bruder, M. R., & Aucoin, M. G. (2021). Virus matrix interference on assessment of virucidal activity of high-touch surfaces designed to prevent hospital-acquired infections. Antimicrobial Resistance & Infection Control, 10(1), 133.
Wulff, D., Chan, A., Liu, Q., Gu, F. X., & Aucoin, M. G. (2020). Characterizing internal cavity modulation of corn starch microcapsules. Heliyon, 6(10).
Yip, A., Smith-Roberge, J., Khorasani, S. H., Aucoin, M. G., & Ingalls, B. P. (2022). Calibrating spatiotemporal models of microbial communities to microscopy data: A review. PLOS Computational Biology, 18(10), e1010533.

Trevor Charles

Alexis Dolphin

Andrew Doxey

Bernard Duncker

John Honek

Laura Hug

Brian Ingalls

Yilan Liu

Kesen Ma

Shannon Majowicz

Brendan McConkey

Jenine McCutcheon

Tizazu McKennon

Christine Moresoli

Kirsten Müller

Josh Neufeld

Jozef Nissimov

Maren Oelbermann

Wayne Parker

Sherry Schiff

Matthew Scott

Maria Strack

Valerie Ward