Zhang, J., Jiang, B., Li, M., Tromp, J., Zhang, X., & Zhang, M. (2007). Computing exact p-values for DNA motifs Bioinformaics, 23, 531 - 537.
References
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Ma, B., Wang, L., & Li, M. (2007). Near Optimal Multiple Alignment within a Band in Polynomial Time The 32nd ACM Symposium on Theory of Computing. 425-434.
Gao, X., Bu, D., Li, S., Li, M., & Xu, J. (2007). Consensus contact prediction by linear programming Presented at the CSB’2007. San Diego, CA conference.
Csuros, M., & Ma, B. (2007). Rapid Homology Search with Neighbor Seeds Algorithmica. 48(2): 187-202.
Zhang, Z., Lin, H., & Li, M. (2007). MANGO: a new approach to multiple sequence alignment
Qian, J., Li, S., Bu, D., Li, M., & Xu, J. (2007). Finding compact structural motifs in many proteins
Gusfield, D., Frid, Y., & Brown, D. (2007). Integer programming formulations and computations solving phylogenetic and population genetic problems with missing or genotypic data
Cui, X., Vinar, T., Brejova, B., Shasha, D., & Li, M. (2007). Homology search for genes
Shan, B., Lajoie, G., Ma, B., & Zhang, K. (2007). Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry
Liu, J., Ma, B., & Zhang, K. (2007). An Algorithm for Searching RNA Motifs in Genomic Sequences Biomolecular Engineering 24: 343-350.