Brown, D., & Harrower, I. (2006). Integer programming approaches to haplotype inference by pure parsimony IEEE ACM Transactions on Computational Biology and Bioinformatics, 3(2):141-154.
References
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Ma, B., Wu, L., & Zhang, K. (2006). Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures Journal of Bioinformatics and Computational Biology 4(3): 709-720.
Brown, D., & Harrower, I. (2006). Toward an algebraic understanding of haplotype inference by pure parsimony
Xu, C., & Ma, B. (2006). Review of software for computational peptide identification from MS/MS data Drug Discovery Today 11(13 14): 595-600.
Doxey, A., Yaish, M., Griffith, M., & McConkey, B. (2006). Ordered surface carbons distinguish antifreeze proteins and their ice-binding regions Nature Biotechnology, 24:852.
Brejova, B., Brown, D., Harrower, I., Lopez-Ortiz, A., & Vinar, T. (2005). Sharper upper and lower bounds for Consensus-Pattern
Ma, B., & Zhang, K. (2005). On the Longest Common Rigid Subsequence Problem
Liu, J., Ma, B., & Li, M. (2005). PRIMA: Peptide Robust Identification from MS/MS Spectra
Han, Y., Ma, B., & Zhang, K. (2005). An Automata Approach to Match Gapped Sequence Tags International Journal of Foundations of Computer Science 16(3): 487-497.
Brejova, B., Brown, D., Li, M., & Vinar, T. (2005). Pygenprop: a python library for interactive programmatic exploration and comparison of organism Genome Properties Bioinformatics 21 (S1):I57-I65.