Ma, B., Wu, L., & Zhang, K. (2005). Improving the Sensitivity and Specificity of Protein Homology Search by Incorporating Predicted Secondary Structures
References
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Kisman, D., Li, M., Ma, B., & Wang, L. (2005). tPatternHunter: Gapped, Fast and Sensitive Translated Homology Search Bioinformatics, 21:4, 542-544.
Csuros, M., & Ma, B. (2005). Rapid homology search with two-stage extension and daughter seeds
Xu, E., Brown, D., & Kearney, P. (2005). The use of functional domains to improve transmembrane protein topology prediction
Brejova, B., Brown, D., Li, M., & Vinar, T. (2005). Clone of ExonHunter: a comprehensive approach to gene finding
Ma, B., & Zhang, K. (2005). The similarity metric and the distance metric
Liu, J., & Li, M. (2005). Finding cancer biomarkers from mass spectrometry data by decision lists Journal of Computational Biology. 12:7, 969-977.
Han, Y., Ma, B., & Zhang, K. (2005). SPIDER: Software for Protein Identification from Sequence Tags Containing De Novo Sequencing Error Journal of Bioinformatics and Computational Biology 3(3):697-716.
Xu, J., Yu, L., & Li, M. (2005). Consensus fold recognition by predicted model quality
Han, Y., Ma, B., & Zhang, K. (2004). An Automata Approach to Match Gapped Sequence Tags