Li, M., Ma, B., Kisman, D., & Tromp, J. (2003). PatternHunter II: Highly Sensitive and Fast Homology Search
References
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2003
Xu, J., Li, M., Kim, D., & Xu, Y. (2003). RAPTOR: optimal protein threading by linear programming
Benson, G., & Page, R. (2003). Algorithms in Bioinformatics https://doi.org/https://link.springer.com/book/10.1007\%2Fb13243
Vogl, C., Badger, J., Kearney, P., Li, M., Clegg, M., & Jiang, T. (2003). Probabilistic analysis indicates discordant gene trees in chloroplast evolution J. Mol. Evol., 56:3, 330-340.
Lanctot, J. K., Li, M., Ma, B., Wang, S., & Zhang, L. (2003). Distinguishing String Search Problems Information and Computation 185: 41-55.
Brejova, B., Brown, D., & Vinar, T. (2003). Vector seeds: an extension to spaced seeds allows substantial improvements in sensitivity and specificity
Liang, C., Smith, J., Hendrie, C., Siu, K., & Li, M. (2003). A comparative study of mass spec de novo sequencing software
Xu, J., Li, M., Lin, G., Kim, D., & Xu, Y. (2003). Protein threading by linear programming
Brejova, B., Brown, D., & Vinar, T. (2003). Optimal DNA signal recognition models with a fixed amount of intrasignal dependency
Xu, J., & Li, M. (2003). Assessing RAPTOR's new linear programming approach for fold recognition in CAFASP3 PROTEINS: Structure, Function, and Genetics, 53(S6):579-584. Invited Paper by CASP5 Organizer.