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[ Author(Desc)] Title Type Year
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Pannabecker, T. Lloyd, Dantzler, W. H. , Layton, A. T. , & Layton, H. E. . (2008). Three-dimensional reconstructions of rat renal inner medulla suggest two anatomically separated countercurrent mechanisms for urine concentration. Federation of American Societies for Experimental Biology.
Pannabecker, T. L. , Dantzler, W. H. , Layton, H. E. , & Layton, A. T. . (2008). Role of three-dimensional architecture in the urine concentrating mechanism of the rat renal inner medulla. American Journal of Physiology-Renal Physiology, 295, F1271–F1285. American Physiological Society.
Patterson, S. E. , & Layton, A. T. . (2021). Computing Viscous Flow Along a 3D Open Tube Using the Immerse Interface Method. arXiv preprint arXiv:2112.12892.
Patterson, S. E. , & Layton, A. T. . (2021). Computing viscous flow along a 2D open channel using the immersed interface method. Engineering Reports, 3, e12334.
Prieto-García, L. , Vicente-Vicente, L. , Blanco-Gozalo, V. , Hidalgo-Thomas, O. , García-Macías, M. C. , Kurtz, A. , Layton, A. T. , et al. (2020). Pathophysiological mechanisms underlying a rat model of triple whammy acute kidney injury. Laboratory Investigation, 100, 1455–1464. Nature Publishing Group US New York.
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Robel, A. , & Layton, A. . (2009). The Lorenz Model.
Ryu, H. , & Layton, A. T. . (2014). Feedback-mediated dynamics in a model of coupled nephrons with compliant short loop of Henle. Biological Fluid Dynamics: Modeling, Computations, and Applications, 628, 209. American Mathematical Soc.
Ryu, H. , & Layton, A. T. . (2014). Tubular fluid flow and distal NaCl delivery mediated by tubuloglomerular feedback in the rat kidney. Journal of mathematical biology, 68, 1023–1049. Springer Berlin Heidelberg.
Ryu, H. , & Layton, A. T. . (2013). Effect of tubular inhomogeneities on feedback-mediated dynamics of a model of a thick ascending limb. Mathematical Medicine and Biology: a Journal of the IMA, 30, 191–212. Oxford University Press.
Ryu, H. , Layton, A. T. , Tubuloglomerular, D. NaCl Deliv, & others, . (2012). HWAYEON RYU. Biomed Eng, 28, 369–380.
Ryu, H. , & Layton, A. T. . (2012). Tubular Fluid Oscillations Mediated by Tubuloglomerular Feedback in a Short Loop of Henle. Federation of American Societies for Experimental Biology.
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Sadria, M. , Layton, A. , & Bader, G. . (2023). Adversarial training improves model interpretability in single-cell RNA-seq analysis. bioRxiv, 2023–05. Cold Spring Harbor Laboratory.
Sadria, M. , Bjornstad, P. , Pottumarthi, P. , Lu-Ping, L. , Pyle, L. , Vigers, T. , & Layton, A. . (2023). A multimodal neural network that distinguishes between type 1 and type 2 diabetes in young persons using MRI and clinical data. Physiology, 38, 5695980. American Physiological Society Rockville, MD.
Sadria, M. , & Layton, A. . (2023). The Power of Two: integrating deep diffusion models and variational autoencoders for single-cell transcriptomics analysis. bioRxiv, 2023–04. Cold Spring Harbor Laboratory.
Sadria, M. , Layton, A. , Goyal, S. , & Bader, G. . (2022). Fatecode: Cell fate regulator prediction using classification autoencoder perturbation. bioRxiv, 2022–12. Cold Spring Harbor Laboratory.
Sadria, M. , & Layton, A. . (2022). A predictive model for estimating protection against CKD and CVD with SGLT2 inhibition in patients with diabetes. The FASEB Journal, 36. The Federation of American Societies for Experimental Biology.
Sadria, M. , Seo, D. , & Layton, A. T. . (2022). The mixed blessing of AMPK signaling in Cancer treatments. BMC cancer, 22, 1–16. BioMed Central.
Sadria, M. , & Layton, A. T. . (2021). A computational model for cell energy balance and metabolism.
Sadria, M. , & Layton, A. T. . (2021). Modeling within-host SARS-CoV-2 infection dynamics and potential treatments. Viruses, 13, 1141. MDPI.
Sadria, M. , & Layton, A. T. . (2021). Aging affects circadian clock and metabolism and modulates timing of medication. Iscience, 24. Elsevier.

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