Publications
Nitric oxide and superoxide transport in a cross section of the rat outer medulla. I. Effects of low medullary oxygen tension. American Journal of Physiology-Renal Physiology, 299, F616–F633. American Physiological Society Bethesda, MD.
. (2010). A numerical method for renal models that represent tubules with abrupt changes in membrane properties. Journal of mathematical biology, 45, 549–567. Springer-Verlag.
. (2002). Numerical methods for fluid-structure interaction—a review. Communications in Computational Physics, 12, 337–377. Cambridge University Press.
. (2012). Numerical simulations of fiber sedimentation in Navier-Stokes flows. Communications in Computational Physics, 5, 61.
. (2009). A numerically efficient and stable algorithm for animating water waves. The Visual Computer, 18, 41–53. Springer-Verlag.
. (2002). . (2009).
Optimal quadratic spline collocation methods for the shallow water equations on the sphere. Submitted to Mathematics and Computers in Simulation.
. (2002). Optimal reservoir conditions for fluid extraction through permeable walls in the viscous limit. arXiv preprint arXiv:1511.01469.
. (2015). An optimization algorithm for a distributed-loop model of an avian urine concentrating mechanism. Bulletin of mathematical biology, 68, 1625–1660. Springer-Verlag.
. (2006). An optimization algorithm for a model of the urine concentrating mechanism in rat inner medulla. In FASEB JOURNAL (Vol. 19, pp. A150–A150). FEDERATION AMER SOC EXP BIOL 9650 ROCKVILLE PIKE, BETHESDA, MD 20814-3998 USA.
. (2005). An optimization study of a mathematical model of the urine concentrating mechanism of the rat kidney. Mathematical biosciences, 223, 66–78. Elsevier.
. (2010). Optimizing SGLT inhibitor treatment for diabetes with chronic kidney diseases. Biological Cybernetics, 113, 139–148. Springer Berlin Heidelberg Berlin/Heidelberg.
. (2019). Oxygen transport in a cross section of the rat inner medulla: Impact of heterogeneous distribution of nephrons and vessels. Mathematical biosciences, 258, 68–76. Elsevier.
. (2014). A partially implicit hybrid method for computing interface motion in Stokes flow. Discrete Contin. Dyn. Syst. Ser. B, 27, 1139–1153.
. (2012). Pathophysiological mechanisms underlying a rat model of triple whammy acute kidney injury. Laboratory Investigation, 100, 1455–1464. Nature Publishing Group US New York.
(2020). The Power of Two: integrating deep diffusion models and variational autoencoders for single-cell transcriptomics analysis. bioRxiv, 2023–04. Cold Spring Harbor Laboratory.
. (2023). Predicted consequences of diabetes and SGLT inhibition on transport and oxygen consumption along a rat nephron. American Journal of Physiology-Renal Physiology, 310, F1269–F1283. American Physiological Society Bethesda, MD.
. (2016). Predicted effect of circadian clock modulation of NHE3 of a proximal tubule cell on sodium transport. American Journal of Physiology-Renal Physiology, 315, F665–F676. American Physiological Society Bethesda, MD.
. (2018). Predicted effects of nitric oxide and superoxide on the vasoactivity of the afferent arteriole. American Journal of Physiology-Renal Physiology, 309, F708–F719. American Physiological Society Bethesda, MD.
. (2015). A predictive model for estimating protection against CKD and CVD with SGLT2 inhibition in patients with diabetes. The FASEB Journal, 36. The Federation of American Societies for Experimental Biology.
. (2022).