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Gao, X., D. Bu, S. Li, M. Li, and J. Xu, "Consensus contact prediction by linear programming", CSB'2007. San Diego, CA, 2007.
Gao, X., D. Bu, S.C. Li, J. Xu, and M. Li, "FragQA: predicting local fragment quality of a sequence-structure alignment", In GIW'2007. Best paper award. Singapore, 2007.
Gao, X., D. Bu, J. Xu, and M. Li, "Improving consensus contact prediction via server correlation reduction", BMC Structural Biology. 9:28, 1-14, 2009.
Gao, X., J. Xu, S.C. Li, and M. Li, "Predicting local quality of a sequence-structure alignment", J. Bioinform & Computat. Biol., 7:5 789-810, 2009.
Gidvani, R.D., P. Sudmant, G. Li, L.F. DaSilva, B.J. McConkey, B.P. Duncker, and B.P. Ingalls, "A quantitative model of the initiation of DNA replication in Saccharomyces cerevisiae predicts the effects of system perturbations", BMC systems biology, 6:78, 2012.
Guan, S., M. Moran, and B. Ma, "Prediction of LC-MS/MS Properties of Peptides from Sequence by Deep Learning", Molecular Cellular Proteomics, 2019.
Gusfield, D., Y. Frid, and D.G. Brown, "Integer programming formulations and computations solving phylogenetic and population genetic problems with missing or genotypic data", Proceedings of the 2007 Conference on Computing and Combinatorics (COCOON), 51-64, 2007.
Guturu, H., A.C. Doxey, A.M. Wenger, and G. Bejerano, "Structure-aided prediction of transcription factor complexes in conserved non-coding elements", Philosophical Transactions of the Royal Society B. 368:20130029. Co-first authors, 2013.

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